In this note we discuss the conditional stability issue for the finite dimensional Calderón problem for the fractional Schrödinger equation with a finite number of measurements. More precisely, we assume that the unknown potential $ q \in L^{\infty}(\Omega) $ in the equation $ ((- \Delta)^s+ q)u = 0 \mbox{ in } \Omega\subset \mathbb{R}^n $ satisfies the a priori assumption that it is contained in a finite dimensional subspace of $ L^{\infty}(\Omega) $. Under this condition we prove Lipschitz stability estimates for the fractional Calderón problem by means of finitely many Cauchy data depending on $ q $. We allow for the possibility of zero being a Dirichlet eigenvalue of the associated fractional Schrödinger equation. Our result relies on the strong Runge approximation property of the fractional Schrödinger equation.
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