American Institute of Mathematical Sciences

Advanced
  • Previous Article
    Generalizations of Naismith's problem: Minimal transit time between two points in a heterogenous terrian
  • PROC Home
  • This Issue
  • Next Article
    Stability, boundedness and uniform boundedness of solutions of nonlinear delay differential equations
2011, 2011(Special): 1404-1412. doi: 10.3934/proc.2011.2011.1404

Wavelet analysis of phase clusters in a distributed biochemical system

Andrey Yu. Verisokin 1, , Darya V. Verveyko 1, , Eugene B. Postnikov 1, and  Anastasia I. Lavrova 2,

1. 

Department of Theoretical Physics, Kursk State University, Radishcheva st., 33, 305000, Kursk, Russian Federation, Russian Federation, Russian Federation
2. 

Institute of Physics, Humboldt-University at Berlin, Newtonstr. 15, 12489, Berlin, Germany

Received  July 2010 Revised  March 2011 Published  October 2011

The spatio-temporal dynamics of glycolysis in distributed medium have been studied both theoretically and experimentally. Different patterns such as travelling waves, standing waves and clusters have been observed in experiment. We describe pattern formation using distributed Selkov model that describes kinetics of phosphofructokinase which is a key enzyme of glycolytic reactions. We have found in numerical simulations that the varying the diffusion coefficient values within the range of 0−10$^$−$^$3 shows a large variety of phase patterns: from the birth of a hierarchy of phase clusters to their complete phase synchronization. In order to understand the mechanism phase clusters emergence and their dynamics we are using continuous wavelet transform.
Keywords: glycolytic reaction, nonlinear oscillator, non-Turing bifurcations, distributed Selkov system, reaction-diffusion.
Mathematics Subject Classification: Primary: 58F15, 58F17; Secondary: 53C35.
Citation: Andrey Yu. Verisokin, Darya V. Verveyko, Eugene B. Postnikov, Anastasia I. Lavrova. Wavelet analysis of phase clusters in a distributed biochemical system. Conference Publications, 2011, 2011 (Special) : 1404-1412. doi: 10.3934/proc.2011.2011.1404
[1]

Abdelghafour Atlas, Mostafa Bendahmane, Fahd Karami, Driss Meskine, Omar Oubbih. A nonlinear fractional reaction-diffusion system applied to image denoising and decomposition. Discrete & Continuous Dynamical Systems - B, 2020  doi: 10.3934/dcdsb.2020321
[2]

Lin Shi, Xuemin Wang, Dingshi Li. Limiting behavior of non-autonomous stochastic reaction-diffusion equations with colored noise on unbounded thin domains. Communications on Pure & Applied Analysis, 2020, 19 (12) : 5367-5386. doi: 10.3934/cpaa.2020242
[3]

Weiwei Liu, Jinliang Wang, Yuming Chen. Threshold dynamics of a delayed nonlocal reaction-diffusion cholera model. Discrete & Continuous Dynamical Systems - B, 2020  doi: 10.3934/dcdsb.2020316
[4]

Leilei Wei, Yinnian He. A fully discrete local discontinuous Galerkin method with the generalized numerical flux to solve the tempered fractional reaction-diffusion equation. Discrete & Continuous Dynamical Systems - B, 2020  doi: 10.3934/dcdsb.2020319
[5]

H. M. Srivastava, H. I. Abdel-Gawad, Khaled Mohammed Saad. Oscillatory states and patterns formation in a two-cell cubic autocatalytic reaction-diffusion model subjected to the Dirichlet conditions. Discrete & Continuous Dynamical Systems - S, 2020  doi: 10.3934/dcdss.2020433
[6]

Serena Dipierro, Benedetta Pellacci, Enrico Valdinoci, Gianmaria Verzini. Time-fractional equations with reaction terms: Fundamental solutions and asymptotics. Discrete & Continuous Dynamical Systems - A, 2021, 41 (1) : 257-275. doi: 10.3934/dcds.2020137
[7]

Pengyu Chen. Non-autonomous stochastic evolution equations with nonlinear noise and nonlocal conditions governed by noncompact evolution families. Discrete & Continuous Dynamical Systems - A, 2020  doi: 10.3934/dcds.2020383
[8]

Youshan Tao, Michael Winkler. Critical mass for infinite-time blow-up in a haptotaxis system with nonlinear zero-order interaction. Discrete & Continuous Dynamical Systems - A, 2021, 41 (1) : 439-454. doi: 10.3934/dcds.2020216
[9]

Qianqian Han, Xiao-Song Yang. Qualitative analysis of a generalized Nosé-Hoover oscillator. Discrete & Continuous Dynamical Systems - B, 2020  doi: 10.3934/dcdsb.2020346
[10]

Zhouchao Wei, Wei Zhang, Irene Moroz, Nikolay V. Kuznetsov. Codimension one and two bifurcations in Cattaneo-Christov heat flux model. Discrete & Continuous Dynamical Systems - B, 2020  doi: 10.3934/dcdsb.2020344
[11]

Touria Karite, Ali Boutoulout. Global and regional constrained controllability for distributed parabolic linear systems: RHum approach. Numerical Algebra, Control & Optimization, 2020  doi: 10.3934/naco.2020055
[12]

Shuang Chen, Jinqiao Duan, Ji Li. Effective reduction of a three-dimensional circadian oscillator model. Discrete & Continuous Dynamical Systems - B, 2020  doi: 10.3934/dcdsb.2020349
[13]

Pierre-Etienne Druet. A theory of generalised solutions for ideal gas mixtures with Maxwell-Stefan diffusion. Discrete & Continuous Dynamical Systems - S, 2020  doi: 10.3934/dcdss.2020458
[14]

Vieri Benci, Marco Cococcioni. The algorithmic numbers in non-archimedean numerical computing environments. Discrete & Continuous Dynamical Systems - S, 2020  doi: 10.3934/dcdss.2020449
[15]

Héctor Barge. Čech cohomology, homoclinic trajectories and robustness of non-saddle sets. Discrete & Continuous Dynamical Systems - A, 2020  doi: 10.3934/dcds.2020381
[16]

Ying Lin, Qi Ye. Support vector machine classifiers by non-Euclidean margins. Mathematical Foundations of Computing, 2020, 3 (4) : 279-300. doi: 10.3934/mfc.2020018
[17]

Sergey Rashkovskiy. Hamilton-Jacobi theory for Hamiltonian and non-Hamiltonian systems. Journal of Geometric Mechanics, 2020, 12 (4) : 563-583. doi: 10.3934/jgm.2020024
[18]

Gunther Uhlmann, Jian Zhai. Inverse problems for nonlinear hyperbolic equations. Discrete & Continuous Dynamical Systems - A, 2021, 41 (1) : 455-469. doi: 10.3934/dcds.2020380
[19]

Manil T. Mohan. First order necessary conditions of optimality for the two dimensional tidal dynamics system. Mathematical Control & Related Fields, 2020  doi: 10.3934/mcrf.2020045
[20]

Adel M. Al-Mahdi, Mohammad M. Al-Gharabli, Salim A. Messaoudi. New general decay result for a system of viscoelastic wave equations with past history. Communications on Pure & Applied Analysis, , () : -. doi: 10.3934/cpaa.2020273

 Impact Factor: 

Tools

Metrics

  • PDF downloads (24)
  • HTML views (0)
  • Cited by (0)

Other articles
by authors

[Back to Top]

Copyright © 2020 American Institute of Mathematical Sciences